PR2 database - Eukaryotic 18S rRNA sequences.

The PR2 database is provided as a data frame.

Usage

pr2

Format

A data frame

Source

PR2 database - https://pr2-database.org/

Details

This is a join between the following tables:

• pr2_main

• pr2_taxonomy

• pr2_sequence

• pr2_metadata

• pr2_silva

The metadata contains three types of fields

• gb_ : originating from the GenBank entry

• eukref_ : annotated by the Eukref project

• pr2_ : annotated by pr2 such latitude and longitude

Description of fields: https://pr2-database.org/documentation/pr2-fields